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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs55846655 chr16:642910 T/A 1.62E-5 208 16.97 14.87 6.57 KM Plot
KIRP rs55853360 chr8:30043774 A/C 7.26E-7 212 16.43 17.52 0.2 KM Plot
KIRP rs55880046 chr16:19941557 T/G 0.000552 210 16.47 15.2 11.43 KM Plot
KIRP rs55909205 chr16:19859851 T/C 4.14E-5 208 15.33 16.43 16.68 KM Plot
KIRP rs55947894 chr11:34805390 C/T 0 214 15.2 17.73 3.83 KM Plot
KIRP rs55971723 chr17:80812067 C/T 8.36E-5 214 15.33 17.2 15.15 KM Plot
KIRP rs55986575 chr17:80806115 C/T 8.36E-5 212 15.88 17.6 15.15 KM Plot
KIRP rs56015437 chr1:198112346 A/T 5.41E-7 213 14.68 33.13 13.65 KM Plot
KIRP rs56024391 chr1:89534198 C/A 2.66E-5 212 16.97 17.52 10 KM Plot
KIRP rs56040867 chr20:25984220 T/G 8.45E-9 209 17.62 13.13 1.17 KM Plot
KIRP rs56061532 chr19:16549890 T/G 2.62E-11 214 16.5 13.1 8.08 KM Plot
KIRP rs56066115 chr1:87676711 T/C 0.000215 213 14.83 25.5 9.25 KM Plot
KIRP rs56075693 chr6:28290328 T/G 1.98E-7 214 16.45 13.6 9.77 KM Plot
KIRP rs56115421 chr11:34801589 T/C 0 214 15.2 17.73 3.83 KM Plot
KIRP rs56140406 chr15:27029105 A/T 0.000146 214 10.83 20.27 15.1 KM Plot